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bugsomething brokensomething broken
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I'm not sure this really has a solution even theoretically, if you consider the layering that needs to happen with inset plots (where the background of the inset plot needs to be drawn on top of the data of the main plot) but posting as a bug for discussion purposes since it's at the very least unexpected.
If you make a layer: 'below'
shape that's data-referenced on one axis and paper-referenced on another, and it crosses two subplots (which could actually be a very nice way to highlight correlations between these subplots) the shape will NOT be below the data of both subplots.
Plotly.newPlot(gd,[
{y:[1,2,3]},
{y:[1,2,3],yaxis:'y2'}
],{
yaxis:{domain:[0,0.4]},
yaxis2:{domain:[0.6,1]},
shapes:[{
xref:'x',yref:'paper',type:'rect',
x0:0.8,x1:1.2,y0:0,y1:1,
fillcolor:'#eee',layer:'below'
}]
})
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bugsomething brokensomething broken